Moritz Wolf

Moritz Wolf P1060564 ghat
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Current work

High Throughput Protein Structure Prediction on Hybrid and Distributed High Performance Architectures.

Publications:

Proceedings:

  • Benchmarking the POEM@HOME Network for Protein Structure Prediction.
    Timo Strunk, Priya Anand, Martin Brieg, Moritz Wolf, Konstantin Klenin, Irene Meliciani, Frank Tristram, Ivan Kondov, Wolfgang Wenzel
    Proceedings of the 3rd International Workshop on Science Gateways for Life Sciences, London, United Kingdom, June 8-10, 2011
  • Development and Evaluation of a GPU-optimized N-Body term for the simulation of biomolecules.
    Timo Strunk, Moritz Wolf, Wolfgang Wenzel
    Proceedings of SimLab@KIT Workshop, Karlsruhe KIT Campus South, November 29/30, 2010

Biophysical Society Meeting Abstracts:

  • Accelerated Monte-Carlo Simulations for All-Atom Protein Folding.
    Moritz Wolf, Strunk, Timo, Wenzel, Wolfgang
    Biophysical Journal 106.2, 260a (2014)
  • Modeling Assembly of the Tata Pore Forming Complex using an Implicit Membrane Model.
    Moritz Wolf, Walther, Torsten H., Gottselig, Christina, Grage, Stephan L., Vargiu, Attilio, Klein, Marco J., Vollmer, Stefanie, Prock, Sebastian, Hartmann, Mareike, Afonin, Sergiy, Stockwald, Eva, Heinzmann, Hartmut, Wenzel, Wolfgang, Ruggerone, Paolo, Ulrich, Anne S.
    Biophysical Journal 104, 288a (2013)
  • Absolute Quality Assessment of Protein Models.
    Strunk, Timo, Moritz Wolf, Wenzel, Wolfgang
    Biophysical Journal 104, 229a (2013)
  • Thermodynamic Characterization of Protein Folding Equilibriums at the All Atom Level.
    Heilmann, Nana, Setzler, Julia, Brieg, Martin, Strunk, Timo, Moritz Wolf, Seith, Carolin, Wenzel, Wolfgang
    Biophysical Journal 104, 369a-370a (2013)
  • Analysis of Amino Acid Specific Energy Contributions to Native Conformations in High-Resolution Protein Structures.
    Strunk, Timo, Moritz Wolf, Wenzel, Wolfgang
    Biophysical Journal 102, 456a (2012)
  • Folding and Self-Assembly of the Pore-Forming Unit Tat-A of the Bacterial Twin-Arginine Translocase.
    Grage, Stephan L., Walther, Torsten H., Moritz Wolf, Vargiu, Attilio, Klein, Marco J., Ruggerone, Paolo, Wenzel, Wolfgang, Ulrich, Anne S.
    Biophysical Journal 100, 345a (2011)
  • Performance of An All-Atom Free Energy Approach For Protein Structure Prediction.
    Anand, Priya, Strunk, Timo, Brieg, Martin, Meliciani, Irene, Moritz Wolf, Klenin, Konstantin, Wenzel, Wolfgang
    Biophysical Journal 100, 48a (2011)

Talks:

  • All-Atom Modelling of Protein Folding and Aggregation.
    Moritz Wolf
    Computer Simulation and Theory of Macromolecules 2013, Hünfeld, April 26-27, 2013
  • High Throughput Protein Structure Prediction on Hybrid and Distributed High Performance Architectures.
    Moritz Wolf, Timo Strunk, Martin Brieg, Ivan Kondov, Wolfgang Wenzel
    High Performance Computing in Science and Engineering, Stuttgart, 2013
  • Simulating the TatA complex in an implicit hydropathy-based pore potential by modifying Gromacs.
    Moritz Wolf, Wolfgang Wenzel
    AK-Ulrich Group Meeting in Freudenstadt 18-22 September 2011

Poster presentations:

  • Accelerated Monte Carlo Simulations for All-Atom Protein Folding.
    Moritz Wolf, Timo Strunk, Wolfgang Wenzel
    Computer Simulation and Theory of Macromolecules 2014, Hünfeld, April 11-12, 2014
  • Accelerated Monte Carlo Simulations for All-Atom Protein Folding.
    Moritz Wolf, Timo Strunk, Wolfgang Wenzel
    Biophysical Society 58th Annual Meeting: February 15-19, 2014, San Francisco, CA
  • Modeling assembly of the TatA pore forming complex using an implicit membrane model.
    Moritz Wolf, Torsten H. Walther, Christina Gottselig, Stephan L. Grage, Attilio V. Vargiu, Marco J. Klein, Stefanie Vollmer, Sebastian Prock, Mareike Hartmann, Sergiy Afonin, Eva Stockwald, Hartmut Heinzmann, Olga V. Nolandt, Wolfgang Wenzel, Paolo Ruggerone, Anne S. Ulrich
    Computer Simulation and Theory of Macromolecules 2013, Hünfeld, April 26-27, 2013
  • Modeling assembly of the TatA pore forming complex using an implicit membrane model.
    Moritz Wolf, Torsten H. Walther, Christina Gottselig, Stephan L. Grage, Attilio V. Vargiu, Marco J. Klein, Stefanie Vollmer, Sebastian Prock, Mareike Hartmann, Sergiy Afonin, Eva Stockwald, Hartmut Heinzmann, Olga V. Nolandt, Wolfgang Wenzel, Paolo Ruggerone, Anne S. Ulrich
    Joint Meeting of the British and German Biophysical Society – 21-23 March 2013 – Hünfeld, Germany
  • Modeling assembly of the TatA pore forming complex using an implicit membrane model.
    Moritz Wolf, Torsten H. Walther, Christina Gottselig, Stephan L. Grage, Attilio V. Vargiu, Marco J. Klein, Stefanie Vollmer, Sebastian Prock, Mareike Hartmann, Sergiy Afonin, Eva Stockwald, Hartmut Heinzmann, Olga V. Nolandt, Wolfgang Wenzel, Paolo Ruggerone, Anne S. Ulrich
    Biophysical Society 57th Annual Meeting: February 2-6, 2013, Philadelphia, PA
  • Performing massively parallel protein simulations using the SIMONA Monte Carlo framework.
    Moritz Wolf, Timo Strunk, Martin Brieg, Wolfgang Wenzel
    Annual Meeting of the Germen Biophysical Society (DgfB), 23-26 09.12, Universität Göttingen
  • Efficient time-resolved conformational sampling using a Kinetic Monte Carlo approach. (poster award)
    Moritz Wolf, Konstantin Klenin, Timo Strunk, Wolfgang Wenzel
    Computer Simulation and Theory of Macromolecules 2011, Hünfeld, April 16-17, 2011